The 67th JSAP Spring Meeting 2020

Presentation information

Oral presentation

12 Organic Molecules and Bioelectronics » 12.6 Nanobiotechnology

[13a-A407-1~10] 12.6 Nanobiotechnology

Fri. Mar 13, 2020 9:00 AM - 11:45 AM A407 (6-407)

Hyonchol Kim(AIST), Hitoshi Asakawa(Kanazawa Univ.)

11:00 AM - 11:15 AM

[13a-A407-8] Detection of intermediate states of the streptavidin-biotin bond along its energy landscape by atomic force spectroscopy with high temporal resolution

〇(DC)Evan Quimada Mondarte1, Tatsuhiro Maekawa1, Hiroyuki Tahara1, Takashi Nyu1, Ganchimeg Lkhamsuren1, Tomohiro Hayashi1 (1.Titech)

Keywords:streptavidin-biotin system, high temporal-resolution atomic force spectroscopy, intermediate metastable states

Although the streptavidin-biotin intermolecular bond has been extensively used in many applications due to its high binding affinity, its exact nature and interaction mechanism have not been well understood. Several reports from previous studies gave a wide range of results in terms of the system’s energy potential landscape because of bypassing some short-lived states in the detection process. We employed a quasi-static process of slowly loading force onto the bond (loading rate = 20 pN/s) to minimize the force-induced disruption and to provide a meaningful description of the system in near-equilibrium. Moreover, by utilizing a fast sampling rate for AFM detection (20 μs/data point), several transient states of the system were clearly resolved in our force spectroscopy measurements. These key strategies allow the determination of the states’ relative positions and free energy levels along the pulling reaction coordinate for the illustration of an energy landscape of the system.