The 95th Annual Meeting of Japanese Society for Bacteriology

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On-demand Presentation

[ODP31] 7. Antimicrobial agents and resistance -b. Antimicrobial resistance

[ODP-215] Emergence and evolution of antimicrobial resistance genes and mutations in Neisseria gonorrhoeae

Koji Yahara1, Ken Shimuta2, Shu-ichi Nakayama2, Aki Hirabayashi1, Masato Suzuki1, Mitsuru Yasuda3, Michio Jinnai4, Hitomi Ohya4, Toshiro Kuroki4, Yuko Watanabe4, Takashi Deguchi5, Kevin C. Ma6, Tatum D. Mortimer6, Vegard Eldholm7, Odile B. Harrison8, Martin C. J. Maiden8, Yonatan H. Grad6, Makoto Ohnishi2 (1AMRRC, Nat. Inst. Infect. Dis., 2Dept. Bact. I, Nat. Inst. Infect. Dis., 3Gifu Univ. Hosp., 4Kanagawa Pref. Inst. Pub. Health, 5Kizawa Memorial Hospital, 6Harvard T. H. Chan School of Public Health, 7Norwegian Institute of Public Health, 8Dept. Zoology, Univ. Oxford)


Antimicrobial resistance in Neisseria gonorrhoeae is a global health concern. Strains from two internationally circulating sequence types, ST-7363 and ST-1901, have acquired resistance to third-generation cephalosporins, mainly due to mosaic penA alleles. These two STs were first detected in Japan; however, the timeline, mechanism, and process of emergence and spread of these mosaic penA alleles to other countries remain unknown. We studied the evolution of penA alleles by obtaining the complete genomes from three Japanese ST-1901 clinical isolates harboring mosaic penA allele 34 (penA-34) dating from 2005 and generating a phylogenetic representation of 1,075 strains sampled from 35 countries. We also sequenced the genomes of 103 Japanese ST-7363 N. gonorrhoeae isolates from 1996-2005 and reconstructed a phylogeny including 88 previously sequenced genomes. Based on an estimate of the time-of-emergence of ST-1901 (harboring mosaic penA-34) and ST-7363 (harboring mosaic penA-10), and more than 300 additional genome sequences of Japanese strains representing multiple STs isolated in 1996-2015, we suggest that penA-34 in ST-1901 was generated from penA-10 via recombination with another Neisseria species, followed by recombination with a gonococcal strain harboring wildtype penA-1. (Yahara et al (2021), Genome Medicine).